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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "OSCA.basic" in publications use:'
type: software
license: CC-BY-4.0
title: 'OSCA.basic: Single-Cell Analysis Basics'
version: 1.21.0
doi: 10.32614/CRAN.package.OSCA.basic
abstract: Deploys basic analysis chapters for the "Orchestrating Single Cell Analysis
  with Bioconductor" book. This describes the steps of a simple single-cell RNA-seq
  analysis, involving quality control, normalization, various forms of dimensionality
  reduction, clustering into subpopulations, detection of marker genes, and annotation
  of cell types. It is intended for users who already have some familiarity with R
  and want to get hands-on with some basic single-cell analyses.
authors:
- family-names: Amezquita
  given-names: Robert
- family-names: Lun
  given-names: Aaron
  email: infinite.monkeys.with.keyboards@gmail.com
- family-names: Hicks
  given-names: Stephanie
- family-names: Gottardo
  given-names: Raphael
- family-names: Hickey
  given-names: Peter
  email: peter.hickey@gmail.com
repository: https://tempbioc.r-universe.dev
repository-code: https://github.com/OSCA-source/OSCA.basic
commit: 4653f341a23a47201a4ea66ce48b9f7e612eca5c
url: https://github.com/OSCA-source/OSCA.basic
date-released: '2025-09-29'
contact:
- family-names: Hickey
  given-names: Peter
  email: peter.hickey@gmail.com