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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "OSCA.multisample" in publications use:'
type: software
title: 'OSCA.multisample: OSCA for Multiple Samples'
version: 1.21.0
doi: 10.32614/CRAN.package.OSCA.multisample
abstract: Deploys the multi-sample analysis chapters for the "Orchestrating Single
  Cell Analysis with Bioconductor" book. This describes the handling of multiple samples
  in a single-cell RNA-seq analysis, starting with integration of multiple datasets
  into a common space for consistent analyses, differential expression comparisons
  between conditions based on pseudo-bulk samples, and differential abundance analyses
  for cell subpopulations. It is intended for readers who are already familiar with
  basic single-cell analyses, possibly after reading some of the prior books in this
  collection.
authors:
- family-names: Amezquita
  given-names: Robert
- family-names: Lun
  given-names: Aaron
- family-names: Hicks
  given-names: Stephanie
- family-names: Gottardo
  given-names: Raphael
- family-names: O'Callaghan
  given-names: Alan
  email: alan.ocallaghan@outlook.com
repository: https://tempbioc.r-universe.dev
repository-code: https://github.com/OSCA-source/OSCA.multisample
commit: b71a42db9db91a1c2aaccb22666a2c2dc1451361
url: https://github.com/OSCA-source/OSCA.multisample
date-released: '2025-01-20'
contact:
- family-names: O'Callaghan
  given-names: Alan
  email: alan.ocallaghan@outlook.com