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  1. Biobase::aaMap
    Dataset: Names and Characteristics of Amino Acids
  2. Biobase::geneCov
    Sample expression matrix and phenotype data.frames.
  3. Biobase::geneCovariate
    Sample expression matrix and phenotype data.frames.
  4. Biobase::geneData
    Sample expression matrix and phenotype data.frames.
    matrix|500 x 26
  5. Biobase::reporter
    Example data.frame representing reporter information
  6. Biobase::sample.ExpressionSet
    Dataset of class 'ExpressionSet'
    ExpressionSet
  7. Biobase::sample.MultiSet
    Data set of class 'MultiSet'
    MultiSet
  8. Biobase::seD
    Sample expression matrix and phenotype data.frames.
    matrix|500 x 26
  9. Biobase::SW
    Class to Contain High-Throughput Assays and Experimental Metadata
  10. DirichletMultinomial::bestgrp
    Data objects used for examples and the vignette
    DMNGroup
  11. DirichletMultinomial::fit
    Data objects used for examples and the vignette
  12. DirichletMultinomial::xval
    Data objects used for examples and the vignette
  13. ontoProc::allGOterms
    allGOterms: data.frame with ids and terms
  14. ontoProc::humrna
    humrna: a data.frame of SRA metadata related to RNA-seq in humans
  15. ontoProc::minicorpus
    minicorpus: a vector of annotation strings found in 'study title' of SRA metadata.
  16. ontoProc::packDesc2019
    packDesc2019: overview of ontoProc resources
  17. ontoProc::packDesc2021
    packDesc2021: overview of ontoProc resources
  18. ontoProc::packDesc2022
    packDesc2022: overview of ontoProc resources
  19. ontoProc::packDesc2023
    packDesc2023: overview of ontoProc resources
  20. ontoProc::PROSYM
    PROSYM: HGNC symbol synonyms for PR (protein ontology) entries identified in Cell Ontology
  21. ontoProc::stopWords
    stopWords: vector of stop words from xpo6.com